Publications Lewis Research Group

nmrML: a community supported open data standard for the description, storage, and exchange of NMR data. Analytical Chemistry Added: Fri Oct 27 2017 07:10 PM

Daniel Schober, Daniel Jacob, Michael Wilson, Joseph A. Cruz, Ana Marcu, Jason R. Grant, Annick Moing, Catherine Deborde, Luis F. de Figueiredo, Kenneth Haug, Philippe Rocca-Serra, John Easton, Timothy M. Ebbels, Jie Hao, Christian Ludwig, Ulrich L. Günther, Antonio Rosato, Matthias S. Klein*, Ian A. Lewis, Claudio Luchinat, Andy R. Jones, Arturas Grauslys, Martin Larralde, Masashi Yokochi, Naohiro Kobayashi, Andrea Porzel, Julian L. Griffin, Mark R. Viant, David S. Wishart, Christoph Steinbeck, Reza M. Salek, Steffen Neumann.

Annual Review of Biochemistry - Metabolite Measurement: Pitfalls to Avoid and Practices to Follow. Added: Sat Aug 05 2017 12:03 AM

Wenyun Lu, Xiaoyang Su, Matthias S. Klein, Ian A. Lewis, Oliver Fiehn, and Joshua D. Rabinowitz. Annual review of Biochemistry. 86:277-304 (2017)

Editorial overview: Recent innovations in the metabolomics revolution. Added: Fri Aug 04 2017 11:58 PM

Jurre J Kamphorst and Ian A Lewis. Current Opinion in Biotechnology, 43:iv-vii (2017).

Digestomics: an emerging strategy for comprehensive analysis of protein catabolism. Added: Fri Aug 04 2017 11:57 PM

Travis S Bingeman, David H Perlman, Douglas G Storey, Ian A. Lewis. Current Opinion in Biotechnology, 43:134-140 (2017).

Evolution of Fitness Cost-Neutral Mutant PfCRT Conferring P. falciparum 4-Aminoquinoline Drug Resistance Is Accompanied by Altered Parasite Metabolism and Digestive Vacuole Physiology. Added: Fri Aug 04 2017 11:57 PM

Stanislaw J. Gabryszewski, Satish K. Dhingra, Jill M. Combrinck, Ian A. Lewis, Paul S. Callaghan, Matthew R. Hassett, Amila Siriwardana, Philipp P. Henrich, Andrew H. Lee, Nina F. Gnädig, Lise Musset, Manuel Llinás, Timothy J. Egan, Paul D. Roepe, David A. Fidock. PLoS Pathogens, 12(11): e1005976 (2016).

Genetic Investigation of Tricarboxylic Acid Metabolism during the Plasmodium falciparum Life Cycle. Added: Fri Aug 04 2017 11:56 PM

Hangjun Ke, Ian A Lewis, Joanne M Morrisey, Kyle J McLean, Suresh M Ganesan, Heather J Painter, Michael W Mather, Marcelo Jacobs-Lorena, Manuel Llinás, Akhil B Vaidya. Cell Reports, 11 (1): 164-174 (2015).

Hierarchy in Pentose Sugar Metabolism in Clostridium Acetobutylicum. Added: Fri Aug 04 2017 11:56 PM

Aristilde, L., Ludmilla Aristilde, Ian A Lewis, Junyoung O Park, Joshua D Rabinowitz. Applied and Environmental Microbiology, 81 (4): 1452-1462 (2015).

Metabolic QTL Analysis Links Chloroquine Resistance in Plasmodium falciparum to Impaired Hemoglobin Catabolism. Added: Fri Aug 04 2017 11:55 PM

Ian A Lewis, Mark Wacker, Kellen L Olszewski, Simon A Cobbold, Katelynn S Baska, Asako Tan, Michael T Ferdig, Manuel Llinás. PLoS Genetics, 10 (1): e1004085 (2014).

Kinetic Flux Profiling Elucidates Two Independent Acetyl-CoA Biosynthetic Pathways in Plasmodium falciparum. Added: Fri Aug 04 2017 11:54 PM

Simon A Cobbold, Ashley M Vaughan, Ian A Lewis, Heather J Painter, Nelly Camargo, David H Perlman, Matthew Fishbaugher, Julie Healer, Alan F Cowman, Stefan HI Kappe, Manuel Llinás. Journal of Biological Chemistry, 288 (51): 36338-36350 (2013).

Relationship between Treatment-seeking Behaviour and Artemisinin Drug Quality in Ghana. Added: Fri Aug 04 2017 11:54 PM

Eili Y Klein, Ian A Lewis, Christina Jung, Manuel Llinás, Simon A Levin. Malaria Journal, 11: 110 (2012).

Semiautomated Device for Batch Extraction of Metabolites from Tissue Samples. Added: Fri Aug 04 2017 11:53 PM

James J Ellinger, Dan C Miller, Ian A Lewis, John L Markley. Analytical Chemistry, 84 (4): 1809-1812.

Novel NMR and MS Approaches to Metabolomics. Added: Fri Aug 04 2017 11:52 PM

Ian A Lewis, Michael R Shortreed, Adrian D Hegeman, John L Markley. The Handbook of Metabolomics: 199-230 (2012).

Role of Aminotransferases in Glutamate Metabolism of Human Erythrocytes. Added: Fri Aug 04 2017 11:52 PM

James J Ellinger, Ian A Lewis, John L Markley. Journal of Biomolecular NMR, 49 (3-4): 221-229 (2011).

Method and System for Determining Compound Concentration in a Mixture using Regression of NMR Intensity Peak Values. Added: Fri Aug 04 2017 11:51 PM

John L Markley, Ian A Lewis, William M Westler, Qiu Cui, Gabriel Cornilescu, Marco Tonelli. US Patent 7,847,547 (2010).

NMR Method for Measuring Carbon-13 Isotopic Enrichment of Metabolites in Complex Solutions. Added: Fri Aug 04 2017 11:51 PM

Ian A Lewis, Ryan H Karsten, Mark E Norton, Marco Tonelli, William M Westler, John L Markley. Analytical Chemistry, 82 (11), 4558-4563 (2010).

Novel Methods for Identifying and Quantifying Metabolites in Complex Biological Extracts by Multidimensional Nuclear Magnetic Resonance Spectroscopy. Added: Fri Aug 04 2017 11:50 PM

Ian A Lewis. PhD Dissertation. University of Wisconsin-Madison (2010).

rNMR: Open Source Software for Identifying and Quantifying Metabolites in NMR Spectra. Added: Fri Aug 04 2017 11:49 PM

Ian A Lewis, Seth C Schommer, John L Markley. Magnetic Resonance in Chemistry, 47 (S1): S123-S126 (2009).

Role of Band 3 in Regulating Metabolic Flux of Red Blood Cells. Added: Fri Aug 04 2017 11:49 PM

Ian A Lewis, M Estela Campanella, John L Markley, Philip S Low. Proceedings of the National Academy of Sciences, 106 (44): 18515-18520 (2009).

Metabolite Identification via the Madison Metabolomics Consortium Database. Added: Fri Aug 04 2017 11:48 PM

Qiu Cui, Ian A Lewis, Adrian D Hegeman, Mark E Anderson, Jing Li, Christopher F Schulte, William M Westler, Hamid R Eghbalnia, Michael R Sussman, John L Markley. Nature Biotechnology, 26 (2): 162-164 (2008).

Method for Determining Molar Concentrations of Metabolites in Complex Solutions from Two-Dimensional 1H-13C NMR Spectra. Added: Fri Aug 04 2017 11:48 PM

Ian A Lewis, Seth C Schommer, Brendan Hodis, Kate A Robb, Marco Tonelli, William M Westler, Michael R Sussman, John L Markley. Analytical Chemistry, 79 (24): 9385-9390 (2007)

Stable Isotope Assisted Assignment of Elemental Compositions for Metabolomics. Added: Fri Aug 04 2017 11:47 PM

Adrian D Hegeman, Christopher F Schulte, Qiu Cui, Ian A Lewis, Edward L Huttlin, Hamid Eghbalnia, Amy C Harms, Eldon L Ulrich, John L Markley, Michael R Sussman. Analytical Chemistry, 79 (18): 6912-6921 (2007).

New Bioinformatics Resources for Metabolomics. Added: Fri Aug 04 2017 11:46 PM

John L Markley, Mark E Anderson, Qiu Cui, Hamid Eghbalnia, Ian A Lewis, Adrian D Hegeman, Jing Li, Christopher F Schulte, Michael R Sussman, William M Westler, Eldon L Ulrich, Zsolt Zolnai. Pacific Symposium on Biocomputing, 12: 157-168 (2007).